123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177 |
- // Copyright 2008-2016 Conrad Sanderson (http://conradsanderson.id.au)
- // Copyright 2008-2016 National ICT Australia (NICTA)
- //
- // Licensed under the Apache License, Version 2.0 (the "License");
- // you may not use this file except in compliance with the License.
- // You may obtain a copy of the License at
- // http://www.apache.org/licenses/LICENSE-2.0
- //
- // Unless required by applicable law or agreed to in writing, software
- // distributed under the License is distributed on an "AS IS" BASIS,
- // WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- // See the License for the specific language governing permissions and
- // limitations under the License.
- // ------------------------------------------------------------------------
- //! \addtogroup gmm_diag
- //! @{
- namespace gmm_priv
- {
- template<typename eT>
- class gmm_diag
- {
- public:
-
- arma_aligned const Mat<eT> means;
- arma_aligned const Mat<eT> dcovs;
- arma_aligned const Row<eT> hefts;
-
- //
- //
-
- inline ~gmm_diag();
- inline gmm_diag();
-
- inline gmm_diag(const gmm_diag& x);
- inline gmm_diag& operator=(const gmm_diag& x);
-
- inline explicit gmm_diag(const gmm_full<eT>& x);
- inline gmm_diag& operator=(const gmm_full<eT>& x);
-
- inline gmm_diag(const uword in_n_dims, const uword in_n_gaus);
- inline void reset(const uword in_n_dims, const uword in_n_gaus);
- inline void reset();
-
- template<typename T1, typename T2, typename T3>
- inline void set_params(const Base<eT,T1>& in_means, const Base<eT,T2>& in_dcovs, const Base<eT,T3>& in_hefts);
-
- template<typename T1> inline void set_means(const Base<eT,T1>& in_means);
- template<typename T1> inline void set_dcovs(const Base<eT,T1>& in_dcovs);
- template<typename T1> inline void set_hefts(const Base<eT,T1>& in_hefts);
-
- inline uword n_dims() const;
- inline uword n_gaus() const;
-
- inline bool load(const std::string name);
- inline bool save(const std::string name) const;
-
- inline Col<eT> generate() const;
- inline Mat<eT> generate(const uword N) const;
-
- template<typename T1> inline eT log_p(const T1& expr, const gmm_empty_arg& junk1 = gmm_empty_arg(), typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == true ))>::result* junk2 = 0) const;
- template<typename T1> inline eT log_p(const T1& expr, const uword gaus_id, typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == true ))>::result* junk2 = 0) const;
-
- template<typename T1> inline Row<eT> log_p(const T1& expr, const gmm_empty_arg& junk1 = gmm_empty_arg(), typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == false))>::result* junk2 = 0) const;
- template<typename T1> inline Row<eT> log_p(const T1& expr, const uword gaus_id, typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == false))>::result* junk2 = 0) const;
-
- template<typename T1> inline eT sum_log_p(const Base<eT,T1>& expr) const;
- template<typename T1> inline eT sum_log_p(const Base<eT,T1>& expr, const uword gaus_id) const;
-
- template<typename T1> inline eT avg_log_p(const Base<eT,T1>& expr) const;
- template<typename T1> inline eT avg_log_p(const Base<eT,T1>& expr, const uword gaus_id) const;
-
- template<typename T1> inline uword assign(const T1& expr, const gmm_dist_mode& dist, typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == true ))>::result* junk = 0) const;
- template<typename T1> inline urowvec assign(const T1& expr, const gmm_dist_mode& dist, typename enable_if<((is_arma_type<T1>::value) && (resolves_to_colvector<T1>::value == false))>::result* junk = 0) const;
-
- template<typename T1> inline urowvec raw_hist(const Base<eT,T1>& expr, const gmm_dist_mode& dist_mode) const;
- template<typename T1> inline Row<eT> norm_hist(const Base<eT,T1>& expr, const gmm_dist_mode& dist_mode) const;
-
- template<typename T1>
- inline
- bool
- learn
- (
- const Base<eT,T1>& data,
- const uword n_gaus,
- const gmm_dist_mode& dist_mode,
- const gmm_seed_mode& seed_mode,
- const uword km_iter,
- const uword em_iter,
- const eT var_floor,
- const bool print_mode
- );
-
-
- template<typename T1>
- inline
- bool
- kmeans_wrapper
- (
- Mat<eT>& user_means,
- const Base<eT,T1>& data,
- const uword n_gaus,
- const gmm_seed_mode& seed_mode,
- const uword km_iter,
- const bool print_mode
- );
-
-
- //
-
- protected:
-
- arma_aligned Mat<eT> inv_dcovs;
- arma_aligned Row<eT> log_det_etc;
- arma_aligned Row<eT> log_hefts;
- arma_aligned Col<eT> mah_aux;
-
- //
-
- inline void init(const gmm_diag& x);
- inline void init(const gmm_full<eT>& x);
-
- inline void init(const uword in_n_dim, const uword in_n_gaus);
-
- inline void init_constants();
-
- inline umat internal_gen_boundaries(const uword N) const;
-
- inline eT internal_scalar_log_p(const eT* x ) const;
- inline eT internal_scalar_log_p(const eT* x, const uword gaus_id) const;
-
- inline Row<eT> internal_vec_log_p(const Mat<eT>& X ) const;
- inline Row<eT> internal_vec_log_p(const Mat<eT>& X, const uword gaus_id) const;
-
- inline eT internal_sum_log_p(const Mat<eT>& X ) const;
- inline eT internal_sum_log_p(const Mat<eT>& X, const uword gaus_id) const;
-
- inline eT internal_avg_log_p(const Mat<eT>& X ) const;
- inline eT internal_avg_log_p(const Mat<eT>& X, const uword gaus_id) const;
-
- inline uword internal_scalar_assign(const Mat<eT>& X, const gmm_dist_mode& dist_mode) const;
-
- inline void internal_vec_assign(urowvec& out, const Mat<eT>& X, const gmm_dist_mode& dist_mode) const;
-
- inline void internal_raw_hist(urowvec& hist, const Mat<eT>& X, const gmm_dist_mode& dist_mode) const;
-
- //
-
- template<uword dist_id> inline void generate_initial_means(const Mat<eT>& X, const gmm_seed_mode& seed);
-
- template<uword dist_id> inline void generate_initial_params(const Mat<eT>& X, const eT var_floor);
-
- template<uword dist_id> inline bool km_iterate(const Mat<eT>& X, const uword max_iter, const bool verbose, const char* signature);
-
- //
-
- inline bool em_iterate(const Mat<eT>& X, const uword max_iter, const eT var_floor, const bool verbose);
-
- inline void em_update_params(const Mat<eT>& X, const umat& boundaries, field< Mat<eT> >& t_acc_means, field< Mat<eT> >& t_acc_dcovs, field< Col<eT> >& t_acc_norm_lhoods, field< Col<eT> >& t_gaus_log_lhoods, Col<eT>& t_progress_log_lhoods);
-
- inline void em_generate_acc(const Mat<eT>& X, const uword start_index, const uword end_index, Mat<eT>& acc_means, Mat<eT>& acc_dcovs, Col<eT>& acc_norm_lhoods, Col<eT>& gaus_log_lhoods, eT& progress_log_lhood) const;
-
- inline void em_fix_params(const eT var_floor);
- };
- }
- typedef gmm_priv::gmm_diag<double> gmm_diag;
- typedef gmm_priv::gmm_diag<float> fgmm_diag;
- //! @}
|